Plate maps

ROLE
Product designer
DURATION
6 months
LAUNCHED
September 2024
Benchling is the leading cloud platform for biotech R&D, helping scientists plan experiments, capture experimental data in real time, and analyze results to accelerate research.
Plate maps enables scientists to visually design, fill and annotate metadata on plate wells. As a result users can more efficiently create plates in Benchling, and capture higher quality experimental data.

Overview

A tool for capturing and visualizing experimental data

Plate maps provide scientists with easier ways to capture data and draw insights from plate-based experiments. The interactive interface allows users to visually annotate wells with experimental metadata, and fill plates with contents tracked in Benchling.

With over $3.75 million in lost ARR tied to this product gap since 2022, this release is crucial for scientists working in cell therapy, gene therapy, and antibody discovery across both mid-market and enterprise customers.

Minimize manual data entry

The previous product solution involved having to re-enter data into structured tables, and append custom columns to capture additional metadata

Surface insights faster

Visualizing relevant layers of metadata on a plate makes it faster to identify errors and draw insights about research programs

Preserve quality data

An immutable record of the actions taken on the plate is saved to the Notebook for data provenance and traceability

Problem

Experimental design and execution as the core problem

Lab work is commonly carried out in plates, yet Benchling's pre-existing plate entity lacked the ability to communicate content information, and capture rich metadata that ultimately aids in experimental analysis. Scientists often relied on point solution tools, Excel, or simple tables to achieve their goals.

Documents capturing customer complaints and user research anecdotes regarding plates date all the way back to 2018. As a result, both users and internal customer success teams have developed various workarounds that result in duplicated data and fragmented workflows.

We see a lot of scientists in the notebook entry use unstructured tables to show ‘this is how my samples are laid out' 'here’s what my concentrations are’. Then they have to translate this to tabular registration tables... scientists tell me how frustrating this is all the time.

Senior Director

Eli Lilly

We've had to create [workarounds] to map multiple well plates to corresponding columns of a registration table. It has created a significant bottleneck to our highthroughput teams where sample registration becomes a nuisance to their workflow

Lab Manager

Deep Genomics

Use cases

Plate maps have two primary use cases:

Visualizing experimental design - scientists need to plan in advance how a plate will be filled. This planning involves: arranging the contents, setting the volume, and capturing concentration values so that come time of execution (pipetting liquid into wells) the likelihood of error is reduced.

Capture metadata for experimental analysis - during downstream analysis, scientists rely on well-level metadata such as sample identity, conditions, and additional context to interpret results and understand how different variables may have influenced the outcome.

Solution

An interactive plate map to visually plan experiments and capture data

The plate map tool allows scientists to visually plan plate-based experiments and annotate metadata on a plate. The key considerations that influenced the designs were: 

  • Cross-app integration - the tool needed to be accessible across apps, specifically Inventory: where lab items are tracked, and Notebook: where experiment context is recorded.
  • Build to scale - we optimized the experience for the most commonly used 96-well plates (12x8), but had to consider other varying dimensions from 8 wells (4x2) up to 384 wells (24x16)
  • Visual satisfaction - the tool should match the user’s mental model of what a plate looks like when planning experiments (vs. a tabular view, which is more helpful when analyzing an experiment)
Annotating well metadata
Example of annotating sample expiration date with a text field
Example of annotating type with user-defined dropdown field
Filling wells with contents and defining transfer values
The plate design helps team leads capture the experimental plan, or how the plate is intended to be filled
The plate record allows operators to document what actually happened at the bench

Outcome

Rapid, broad, and deep customer adoption

Plate maps released for general availability in September 2024.

Within the first month...

  • 850+ plates created
  • Adopted by 116 customer accounts
  • Utilized by 270 active users

Within the first year...

  • 12.1K+ plates created
  • Adopted by 333 customer accounts
  • Utilized by 1,450 active users

We presented [plate maps] to Roche/gRED onsite this morning and it generated confetti reactions, applause and comments such as: 'In my previous life I was designing these systems and I have to say as a first pass this is stunning. I am blown away'.

Head of Product

Benchling

I love the flexibility, it’s extremely important because not every experiment is going to go the way you expected. The group that tested out the new plate maps is really excited to have it this year.

Bioinformatician

Anaptys

Team credits

Product designer – Luna Chen
Engineers –  Christoph Meeple, Ariel Schwartz, Lewis Silletto, Felicia Zhang
Product manager – Lily Helfrich

Other work

Insights Analysis

2023 - 2024

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R&D bench race

2022

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